CDS
| Accession Number | TCMCG051C09758 |
| gbkey | CDS |
| Protein Id | XP_024453759.1 |
| Location | join(2666242..2666301,2666542..2666622,2666701..2666808,2666936..2667016,2667102..2667190,2667290..2667414,2667501..2667562,2667998..2668133,2668396..2668458,2668538..2668611,2668699..2668833,2669908..2669946,2672384..2672452,2672618..2672680,2672763..2675823,2676273..2676337,2676419..2676498,2677337..2678138,2678826..2679355,2679826..2680258) |
| Gene | LOC7478135 |
| GeneID | 7478135 |
| Organism | Populus trichocarpa |
Protein
| Length | 2051aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024597991.1 |
| Definition | protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X3 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | KL |
| Description | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11320
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGCGTCGAAAGGTCCAAGGTCTAAGCTTGATCACGAGACGAGAGCTCGGCGTCAAAAGGCACTGGAAGCTCCAAGAGAACCCCGTCGCCCGAAAACTCACTGGGATCATGTTTTGGAGGAAATGGTTTGGTTGTCGAAGGATTTTGAGTCGGAGAGGAAATGGAAATTGGCGCAAGCCAAGAAAGTGGCTTTAAGAGCAAGCAAGGGCATGTTGGATCAGGCCACCAGAGGAGAAAAGAAATTGAAGGAAGAGGAGCAGCGGTTGCGAAAAGTAGCGGTCAATATTTCAAAGGATGTAAAGAAGTTCTGGGTTAAAATAGAAAAGCTGGTGCTTTACAAGCATCAGATGGAGCTTGATGAGAAGAAGAAAAAGGCACTTGATAAGCATCTTGAGTTTCTTCTAGGACAAACTGAGAGGTACTCTACAATGCTGGCAGAAAATCTAGTGGAGAAACCACCAGAGCAATATTTTGCACCAGAAAAACCGAGTATTGCGGATAGGGTAGGAGATGATGCTAATACACCCCTGCAAGTTGTTGATGAGGCCCAAGTGGACACTGCAGACAATGACGATGAGTATGATGTGCAATCTGAAGATGAAGTGGAAGATGATGAGCATACTATTGAGGAAGATGAGGCTCTTATAACCAAAGAAGAAAGGCAAGAAGAATTGGAAGCTCTGCACAATGAAATGGATATTCCCCTTGAGGAGCTACTCAAGCGTTACGCTGTAGAGAAAGGTGGCAGGGAAAGTAGTGAAAATGGAGCTAAGCCATGTGCAAATGGGGAAGAACATTGTGAGAGCAAAGGAGAAGATATTTCTGCTGCTTGTGAGATGGAGATAAGCAGCTCACCTGTTAATGCTGGTCGTCGTTGTGGTGAAAATAATGGTGCCTTGCCCATTCCAGACAACAATTTATTGGAAATTGGGGCATATGAAACCAGAAATCAGTTAAGTATCTCTGAGGATCCAGCCAGAGAACATGTGCCATATGATTTCAATGATGAACAGGAAGATGGTGATTTTGATCTTGCCGCTGAAGAAGAAAAGGATGATGAGACAACCTTGTTGGAGGAGGAAGAGATGGCAAAAGCAGATTCAAACAATCCCATAGATGAGATTTTGTTACTGCAAAAGGAGAGTGAAATTCCTTTGGAAGAATTGCTTGCAAGGTATACAAAGGAGCCAAACAGTGAAGTTTCAGAGGATGAATCTGAATACGCACCAGTATTATCAGACAATATGTCAAATTCCCCAGGCCATGAAGAAGAACTGAAGCAGCTGGATAACTCAATGGATGAAATGGTTGAACATGGGGAACATCCTCTTGTAGAAGAACAAGAGAAGGGAAATGAAGAAATTTCAGAAGAAGGAAGGGAGAGTGAAAGTAAGATAGCTGATGCTGCTGCTGCTGCAAGATCTGCACAACCAACAGGCAATACATTCTCGACAACCAAAGTGCGCACAAAATTCCCCTTTCTTCTCAAGTATCCTCTTCGTGAATATCAACATATAGGCCTCGATTGGCTTGTTACAATGTATGAACAAAGATTAAATGGGATTCTAGCTGATGAAATGGGGCTTGGAAAGACGATCATGACAATTGCTTTGCTTGCACACCTAGCATGTGAAAAGGGAATATGGGGTCCTCATCTGATTGTGGTTCCAACAAGTGTCATGCTTAACTGGGAAACAGAGTTTCTTAAATGGTGTCCTGCCTTCAAGATTTTAACATATTTTGGCAGTGCAAAAGAGCGTAAATGCAAGAGGCAAGGTTGGCTGAAACCAAATTTCTTCCATGTATGCATAACAACTTACAGACTGGTTATACAGGATTCTAAAGTCTTCAAGAGGAAGAAATGGAAGTATTTGATTTTGGATGAAGCTCATCTGATTAAAAATTGGAAGTCCCAGAGATGGCAAACTCTTTTAAATTTCAATTCAAAAAGACGCATCTTATTAACTGGCACACCTCTGCAGAATGATCTCATGGAACTGTGGTCACTAATGCATTTCTTGATGCCCCACATCTTTCAATCTCACCAGGAATTTAAGGACTGGTTCAGTAATCCAATAACTGGGATGGTGGAGGGACAAGAAAGAGTGAACAAAGAAGTTGTTGATCGTTTGCACAATGTTCTCCGTCCGTTTATCCTCCGTCGATTGAAAAGGGACGTGGAGAAGCAACTCCCCATGAAAGTTGAACATGTAATCTTTTGTAGACTTTCAAGGAGGCAGCGTAACTTGTACGAGGATTTCATTGCTAGTTCAGAGACACAAGCTACCCTTGCCACTGCCAACTTTTTTGGGATGATCAGCATCATAATGCAACTTCGTAAAGTTTGTAATCATCCCGACTTATTTGAGGGTCGTCCAATTATTAGTTCTTTTGATATGGCTGGTGTGGACATCCAATTGAGTAGTTCTATTTGTTCAATGTTTTCACCTGGCCCATATTCATCTGTAGATCTTTGTGCTTTGGGGCTTATATTTACACATCTTGATTTTAACATGGTTTCTTGGGAGTGCGATGAAGTAAAGGCTATTGCAACTCCTTCAAGATTAATTGAAGAGCGTGCCAATTTGGCTAACATAGAAGATGTTGGGCCTGGGTCTAAACATTTGAAGAGATTGCCTGGAACAAATATTTTTGAAGAGATTAGAAAGTCATTATTGGAGGGGAGATTAAGAGAGATGAAGCAACGGGCAGCATCTATTGCATGGTGGAATTCTTTGAGGTGTCGGAAAAAACCCATATACTCAACAACCCTACGAGAACTTCTCACGGTGAAGCATCCTATCTATGATATCCATCGCCAAAAAGTTGAGCGACTCTCCTCGTTATGCTCCTCTAAGCTTGGTGATGTTGTTCTTTCACCAATTGAACGGTTCCAGAAGATGACTGATCTCGTGGAATCATTTATGTTTGCAATTCCAGCAGCACGTTCCACTGCACCTATCTTCTGGTGCAGTCAGACCAGAACTCCTGTGTTTCTGCATTCAACTTATGAGGAGAAATGCTCTGAAATGTTGTTGCCTCTTCTTTCACCTATTAGACCTGCAATTGTCCGGAGACAACTGTATTTCCCAGACAGGCGCCTAATACAGTTTGACTGTGGTAAATTGCAGGAGCTTGCTATTTTGCTCAGGAAGTTAAAGTCAGAAGGCCATCGGGTATTAATATTCACACAGATGACCAAGATGCTGGATATTTTGGAGGCTTTCATAAACCTGTACGGCTACACTTACATGCGTTTAGATGGATCTACTCAACCAGAGGATAGACAAACTTTAATGCAGCGTTTCAACACCAATCCCAAAATATTTATCTTCATTCTATCAACCCGTAGTGGGGGTGTTGGCATCAATCTTGTTGGGGCAGATACTGTAATCTTCTATGATAGTGACTGGAATCCTGCGATGGATCAACAAGCCCAAGATCGCTGCCATCGGATAGGACAGACACGTGAAGTGCATATCTACAGGTTAATCAGTGAGAGCACCATTGAAGAAAATATCTTAAAGAAAGCCAATCAGAAGCGTGCTCTTGATGATCTAGTTATACAGAGTGGAGGATACAACACAGAATTTTTCAAGAAGCTCGATCCTATGGAATTATTTTCTGGGCATAAAACACTTCAGATTAAGAACATGCAGAGGGAGAAAAACAATAACAATGGAAATGAGGTTTCTTTGTCTAATGCAGACGTGGAGGCTGCTCTGAAATATGCTGAAGATGAAGCAGATTACATGGCATTGAAGAAAGTCGAACAGGAAGAGGCTGTAGACAACCAAGAGTTTACTGAAGAGGCCATTGGGAGATTGGAAGATGATGAATTCGTAAATGATGATGATATGAAGGCTGATGAGCCTACAGACCATGAGATGACAACTTATTGCAAAGAGGGTGAGGTGAATTTAGATGAAAATGATTGCATTGAAGAGAGAGCTGTAACTTTTACTGGGAACAAAGATGATGTCGATATGTTGGCTGATGTCAAGCAGATGGCAGCGGCGGCAGCTGCTGCTGGACAAGCTATCTCATCCTTCGAAAATCAGCTACGTCCAATAGACAGATATGCAGTCCGTTTTCTGGAACTGTGGGATCCAATTATAGACAAAGCAGCCTTGGAATCCCAAGTTAGGTTTCAGGAGACAGAATGGGAGCTTGATCGTATTGAGAAGTACAAGGACGAAATGGAAGCTGAGATTGATGATGATGAAGAGCCATTGGTGTATGAAAGATGGGATGCTGATTTTGCGACCGAGGCATACCGACAACAAGTTGAGGCGCTAACTCAATATCAGTTGATGGAAGAAAAGGAAGCTGAAGCTGAAGCTGAAGCTAATGAGAAGGAAAGTGCAGATGGACATTTAGATGCTATGGTCAGGTGTAAAGTGCCACGCAATCCTAAATCGAAGTCTAAGAAGAAACCAAAGAAAACCAAGTTCAAATCCCTCAAGAAAGAATCTTTAACTTCTGAATTGAAACACATGAAAGTGGAGGCATCAATAGAAACTTTGTCTGCAGATGATGAGGACGACGACGACGACGTGATATATCCTGATGATGGTACATATTCAGATACTACGTCTCCTTATTCAAGTGTGCAGAGAAAACGTAAGAAAGCAGAATTAGCAATTGATATAGACAAAAAGAGGTCAAGGAAGAATAGCAAGAAATTCAAAAAAGCTCCCGAAACGTGCTCTTTTGATGTAGATTCGGATCTGTCTGGAAAGCAGCATGGCAGGTCTATGGAATTAAAACCATATGAGGTGGTTTCTGATCTTGAGCAGAAACCAGCTGGCAGGAGCAAGATGGGAGGGAAAATCTCCATCAGTACCATGCCAGTGAAACGGGTGTTGATGATAAAGCCAGAGAAGTTAAAGAAAGGGAATGTTTGGTCGAGAGATTGTGTTCCTCCACCTGATTCATGGTTGCCACAGGAGGATGCAATATTATGTGCTGTTGTACATGAATATGGCCCTCACTGGAGCTTGGTCAGTGAAACTCTGTATGGGATGGCTGCTGGTGGGTTTTATCGGGGAAGATACCGCCATCCAGTTCATTGTTGTGAGAGATTTAGAGAACTAATCCATAGATATGTTTTATCTTCTCCAGAATATCCTATCAATAATGAAAAGATGAGCAATATGGTCTCCGGGAAGGCCCTTCTCAAAGTAACTGAGGATAACATACGGATGTTATTAAATGTTGCTGCTGAGCAGCCAGACCATGAGTTACTTCTCCAGAAGCACTTCACAGCACTGCTTTCTGCTGTGTGGAGGGTGAACTCTCGTGCTGAACGTCAACAGAACTTGTCATCATCTCGAAATGCTCTTTATAATCATGGAAGGGTTTTCAATTCTTCTGTCAATCAGTTACCTTCGAATTCCTCAAAGGAATCTGCAAAAAGAATGAAATTCACTAATTTGGGACATAGTAGCAAGTTGCTTGCTGATGCACTCCATGATGCCAGCAGTAGAAGGCCAGATGATAGAGTTTCCTATTCCAACTTGAGCGAAGTTGCTCCTGCCATTGGTGAGCAGTTGGAAATAACATTGGAATTCCAAAAAGAGGAAGATGATTCTTTGATTCAATTCCCACCTATAATAAGTTTGTCAATACCTAGCTCAGCGCCATTGACATCAGTAAATAAGGATAGAGCAGAGGCTCACCATCTCAGAGCATCCACAAGTATAGCTGAAAATCGATTCAGGGATGCAGCAAGAGCTTGTGTTGAAGGAGATCTGGGCTGGGTTTCATCTTCCGCACCAGCAAATGATTTCAAGTTGCGGCTGCCTTCAAAGACGCAGTCCTTGGGAAAGCACAAGCTCTCCGTCTCCGAGTCAACCAAGCCTCCTAGGTCAAAGATGAAGAAAACTTTAATAGAGCACAGTCAAGGACACCTTTTTGCCGAGCCAGTATCCCAGCCACTGCCTGTACTGTCATCCAGGGATCCCAATTTAAGGTTTGACCTGCCGCCAATAGCCATTCAGGATGACAAGGATGAATATTCTATCTCATGCATTGAGAAGGAGCTTTCAGCGGAAATGGGGACCTGGGATGCTGTCGCACATGACTATGTTCTTGGTTTCACATCGGGTCTTGATGATTTTTCATCGTTGCCAGAATTTACTGACATCGGATAA |
| Protein: MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMLDQATRGEKKLKEEEQRLRKVAVNISKDVKKFWVKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEKPPEQYFAPEKPSIADRVGDDANTPLQVVDEAQVDTADNDDEYDVQSEDEVEDDEHTIEEDEALITKEERQEELEALHNEMDIPLEELLKRYAVEKGGRESSENGAKPCANGEEHCESKGEDISAACEMEISSSPVNAGRRCGENNGALPIPDNNLLEIGAYETRNQLSISEDPAREHVPYDFNDEQEDGDFDLAAEEEKDDETTLLEEEEMAKADSNNPIDEILLLQKESEIPLEELLARYTKEPNSEVSEDESEYAPVLSDNMSNSPGHEEELKQLDNSMDEMVEHGEHPLVEEQEKGNEEISEEGRESESKIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEQRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKCKRQGWLKPNFFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPITGMVEGQERVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKVEHVIFCRLSRRQRNLYEDFIASSETQATLATANFFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGVDIQLSSSICSMFSPGPYSSVDLCALGLIFTHLDFNMVSWECDEVKAIATPSRLIEERANLANIEDVGPGSKHLKRLPGTNIFEEIRKSLLEGRLREMKQRAASIAWWNSLRCRKKPIYSTTLRELLTVKHPIYDIHRQKVERLSSLCSSKLGDVVLSPIERFQKMTDLVESFMFAIPAARSTAPIFWCSQTRTPVFLHSTYEEKCSEMLLPLLSPIRPAIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEDRQTLMQRFNTNPKIFIFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHKTLQIKNMQREKNNNNGNEVSLSNADVEAALKYAEDEADYMALKKVEQEEAVDNQEFTEEAIGRLEDDEFVNDDDMKADEPTDHEMTTYCKEGEVNLDENDCIEERAVTFTGNKDDVDMLADVKQMAAAAAAAGQAISSFENQLRPIDRYAVRFLELWDPIIDKAALESQVRFQETEWELDRIEKYKDEMEAEIDDDEEPLVYERWDADFATEAYRQQVEALTQYQLMEEKEAEAEAEANEKESADGHLDAMVRCKVPRNPKSKSKKKPKKTKFKSLKKESLTSELKHMKVEASIETLSADDEDDDDDVIYPDDGTYSDTTSPYSSVQRKRKKAELAIDIDKKRSRKNSKKFKKAPETCSFDVDSDLSGKQHGRSMELKPYEVVSDLEQKPAGRSKMGGKISISTMPVKRVLMIKPEKLKKGNVWSRDCVPPPDSWLPQEDAILCAVVHEYGPHWSLVSETLYGMAAGGFYRGRYRHPVHCCERFRELIHRYVLSSPEYPINNEKMSNMVSGKALLKVTEDNIRMLLNVAAEQPDHELLLQKHFTALLSAVWRVNSRAERQQNLSSSRNALYNHGRVFNSSVNQLPSNSSKESAKRMKFTNLGHSSKLLADALHDASSRRPDDRVSYSNLSEVAPAIGEQLEITLEFQKEEDDSLIQFPPIISLSIPSSAPLTSVNKDRAEAHHLRASTSIAENRFRDAARACVEGDLGWVSSSAPANDFKLRLPSKTQSLGKHKLSVSESTKPPRSKMKKTLIEHSQGHLFAEPVSQPLPVLSSRDPNLRFDLPPIAIQDDKDEYSISCIEKELSAEMGTWDAVAHDYVLGFTSGLDDFSSLPEFTDIG |